Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846378.1_cds_XP_016509631.1_22548
CDS Infomation

[gene=LOC107827082] [db_xref=GeneID:107827082] [protein=pentatricopeptide repeat-containing protein At4g38150-like] [protein_id=XP_016509631.1] [location=complement(3853..4863)] [gbkey=CDS]
Sequence

ATGAGAACAACATTATTGAGAAAGAAGGGTATTAACATTTATTGGAAAAATTACAGCAGT
CTCTGCTCTCCTAAGGTGAAAGCAAATGAGACACTTTCGTCAACAACATTACCCTTGTTT
AGCAGCTCGAACAAATACCCTGATGAATCCACTCAGTCTAACTACCCTCCTCCTCCTGAT
CCTATACCGAATAGGCCCTTAAGAGCTGATTCCAGAAGGCCCTTCAATCCACCCCAAAGA
CAACGCCCCAGCAGCAGCAACCCCACCCATTCTACAACTTTTAGAAGACCTGGTGAGAAT
AATGAAAATCAAATCGAGTGCCAGGATAGCCAAGATTTTCTGAAAAGGTTTCAGCTTGGA
TTTGATCGTAAAGATGAAAATCCAAACACCAATCCTGCACGGAGTGACACTCCTGCTTCC
GAGTCACCTCCAGCTCCACCCGAAGATTCAGATGAGATATTCAAGAAAATGAAAGAAACT
GGCCTAATACCCAATGCTGTAGCTATGCTTGATGGGCTTTGCAAGGACGGCTTGGTCCAG
GAGGCCATGAAGCTCTGTGGTCTGATGCGTGAAAAGGGTACCATACCTGAAGTTGTTATC
TACACTGCTGTGGTACAAGGCTTTTGTAAAGCCCACAAATATGATGATGCTGTGAGGATC
TTCCGGAAAATGCAAGGCAATGGCATTATTCCTAATGCTTTTAGTTACAGTAGCTTAATC
CGGGGGCTCTGTCAGGGAAAGAGATTAGAGGACGCCCTCGAGTTTTGCTTGGAGATGCTG
GAGGCTGGACATTCCCCCAACATGACGACCTTTGTGGATTTGGTCGATGGGTATTGCAAA
GAGAAGAGTCTGGAAGATGCCCAAAGTATGATTAAAGCGGTGAGGCAGAAGGGTTTTATC
CTTGATGAGAAAGCTGTTAGGGAATATTTGGACAAGAAAGGGCCATTCTTGCCGCTGGTT
TGGGAGGCAGTACTGGGGAAGAAAGCTTCACAGAGGCAATCTCTCTTTTAA

Peptide Sequence

PEP ID

XP_016509631.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like [Nicotiana tabacum]
Sequence

MRTTLLRKKGINIYWKNYSSLCSPKVKANETLSSTTLPLFSSSNKYPDESTQSNYPPPPD
PIPNRPLRADSRRPFNPPQRQRPSSSNPTHSTTFRRPGENNENQIECQDSQDFLKRFQLG
FDRKDENPNTNPARSDTPASESPPAPPEDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQ
EAMKLCGLMREKGTIPEVVIYTAVVQGFCKAHKYDDAVRIFRKMQGNGIIPNAFSYSSLI
RGLCQGKRLEDALEFCLEMLEAGHSPNMTTFVDLVDGYCKEKSLEDAQSMIKAVRQKGFI
LDEKAVREYLDKKGPFLPLVWEAVLGKKASQRQSLF

Transcript Sequence

Gene sequence data has not been registered.